Citations

If you use HOBIT, please cite:

• Sun J, Sese J, and Shimizu KK. A moderated statistical test for detecting shifts in homeolog expression ratios in allopolyploids. bioRxiv 2025;2025.07.01.660977. 10.1101/2025.07.01.660977

If you use HomeoRoq, please cite:

• Akama S, Shimizu-Inatsugi R, Shimizu KK, and Sese J. Genome-wide quantification of homeolog expression ratio revealed nonstochastic gene regulation in synthetic allopolyploid Arabidopsis. Nucleic Acids Res. 2014;42(6):e46. 10.1093/nar/gkt1376